Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTCAACCACAGCACTGCAGG
(((((((((.(((((.(((..&)))))))).))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047440064
GeneSymbolNCOA6
Binding site3287,3308
Score0.846
Seed1
Au0.5
Energy-20.5
Binding len21
Me-5.413
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure