Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGACATCGAGCAGAAAGTCCAGCGCTACAGCCAGCAGCTGCGC
.((((((((((((((((..((&.))..))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330483
GeneSymbolTRIM62
Binding site359,404
Score1.0
Seed1
Au0.382
Energy-28.7
Binding len23
Me-3.793
Phylopstem-0.36795861176470596
Phylopflank-0.060890165000000024
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure