Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGCAGCAGCGGCCCTACGGCTATGAACAGGGCCAGTA
.((((((.(((..(((((((((&))))))))).........................))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047440085
GeneSymbolSS18L1
Binding site1799,1843
Score0.846
Seed1
Au0.441
Energy-25.2
Binding len44
Me-10.743
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings35
Pairings in 3prime end8
PositionCDS
2D Structure