Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAAGCGCTGCAGCTGCT
..(((((((((((..(..(((&)))..)..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330483
GeneSymbolTRIM62
Binding site194,214
Score1.0
Seed1
Au0.397
Energy-24.7
Binding len20
Me-6.549
Phylopstem0.11099319090909088
Phylopflank0.33964459625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure