Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGAGCGGCTGCACCGGCTGCT
..(((((((((((((((((((&)))))...)))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330483
GeneSymbolTRIM62
Binding site275,301
Score0.846
Seed1
Au0.338
Energy-24.4
Binding len26
Me-4.957
Phylopstem-0.35892743600000004
Phylopflank0.15884756374999992
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure