Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGCACCGCAGACAGCGC
.(((.(((((((.(((..(((&)))..))))))))).).))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047440085
GeneSymbolSS18L1
Binding site1776,1797
Score0.846
Seed0
Au0.294
Energy-20.2
Binding len21
Me-9.201
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure