Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGAACAGGCGGGAGAGCGCGGCGGCGGCTGCGGG
((((((((((.(((((.....&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348343
GeneSymbolSTXBP5L
Binding site84,119
Score0.923
Seed1
Au0.412
Energy-24.6
Binding len18
Me-6.762
Phylopstem-0.17826119999999998
Phylopflank1.6136040499999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure