Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCCGCAGCCGCAGCCGCC
..((.(((((((((((.((((&))))...))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047440558
GeneSymbolMAP1LC3A
Binding site9,31
Score0.846
Seed0
Au0.25
Energy-27.4
Binding len22
Me-9.076
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end7
Position5UTR
2D Structure