Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGACTGTCTCGGGTGTCAGCTTAACATTCCACAGATGGGGGGTTAGTT
.(((((((((((((((((....&.)).)))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047440758
GeneSymbolHMGN1
Binding site2069,2119
Score1.0
Seed1
Au0.632
Energy-20.7
Binding len21
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure