Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAGCTGCTGCTGTAT
.((((((.(((((((......&))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047440758
GeneSymbolHMGN1
Binding site1352,1367
Score0.846
Seed1
Au0.588
Energy-18.0
Binding len15
Me-6.34
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end2
Position5UTR
2D Structure