Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCCGGCTCGTCGCAAGCGCAGGGAGGCCCGTTCCAAGCCAGC
..((((((((((((((.((...&.)).)))))))).........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047441007
GeneSymbolRUNX1
Binding site1554,1600
Score0.846
Seed1
Au0.309
Energy-22.8
Binding len28
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end4
PositionCDS
2D Structure