Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGTAAAGGCCGCCTTGTTAGAGAAGATGAGAATGATGCCAGTGA
(((((((.(((((((((((...&)))))).)))))............................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047441052
GeneSymbolPAXBP1
Binding site827,875
Score0.846
Seed1
Au0.515
Energy-21.2
Binding len48
Me-6.251
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure