Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCGACAAGGACAGATTCCTGGTCCTCGGCTCGTGCTGCAGTTTGTGCAGC
(((((((.(((((((..(((.&.))))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047441165
GeneSymbolCDPF1
Binding site188,242
Score0.846
Seed1
Au0.382
Energy-18.9
Binding len20
Me-6.484
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure