Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAA
((((((((((((.....((((&.)))).....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047441419
GeneSymbolDGCR8
Binding site4078,4117
Score0.846
Seed1
Au0.529
Energy-23.4
Binding len23
Me-7.052
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure