Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TATGCCAGGTT
((((((((((............&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001348413
GeneSymbolNEK4
Binding site2359,2370
Score0.923
Seed1
Au0.603
Energy-16.4
Binding len11
Me-13.224
Phylopstem2.5158414
Phylopflank2.7275078687500005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure