Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGA
(((((((((((((((((((...&.)))))))))..)))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001348420
GeneSymbolDNAJC21
Binding site3133,3180
Score0.846
Seed1
Au0.338
Energy-26.4
Binding len26
Me-3.938
Phylopstem-0.034474658333333325
Phylopflank-0.10662408749999996
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure