Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGTGCCGCGGTGCGGG
(((((.(((((((....(((.&)))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330485
GeneSymbolPREB
Binding site173,193
Score0.846
Seed0
Au0.206
Energy-21.0
Binding len20
Me-7.664
Phylopstem0.14463328571428574
Phylopflank0.285437748
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure