Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAAGGCCTCTGTGTGGCAGAAGGATCAGCTGGTGACACAGCTGCAC
.((((((((((((((((((((&)))))).......................))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330485
GeneSymbolPREB
Binding site861,911
Score0.846
Seed1
Au0.471
Energy-20.7
Binding len50
Me-3.793
Phylopstem3.823428218367348
Phylopflank3.574650310000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure