Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCAACAACCTGCAGAGGTAC
.(((..((((((((((..(((&)))...)))))).))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047441521
GeneSymbolCLTCL1
Binding site2452,2475
Score0.923
Seed0
Au0.544
Energy-20.0
Binding len23
Me-9.813
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure