Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGCAACACCAGCTATACCGCAGC
(((((((((..((((((((((&)))).))))))..))))).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047441533
GeneSymbolCDC45
Binding site1114,1142
Score0.846
Seed1
Au0.426
Energy-21.0
Binding len28
Me-8.005
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure