Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGGGCACTGGCAGCTGCAGC
((((((((((.(.(((..(((&))).....))).).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047441561
GeneSymbolHPS4
Binding site4521,4546
Score0.846
Seed1
Au0.412
Energy-22.8
Binding len25
Me-8.051
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure