Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTAGATGGAAGAGGATCCTATCCGAAGCTAGG
..((((((((((((((((((((&)))))))))).....)))))...........))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047441584
GeneSymbolHPS4
Binding site2944,2981
Score0.923
Seed1
Au0.559
Energy-23.1
Binding len37
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings27
Pairings in 3prime end8
Position3UTR
2D Structure