Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACCACCGACTACTTCCCTGACCGCCAGGGCCTGCAGA
((((((((((((((((((((.&))))))................))))))...))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047441634
GeneSymbolDEPDC5
Binding site2467,2508
Score0.846
Seed1
Au0.456
Energy-21.6
Binding len41
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings35
Pairings in 3prime end7
PositionCDS
2D Structure