Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGCGGTTTTTGCTTTTTCAACTCTGTGGCTGTGGCTGCT
..(((((((((((((((.(((&.))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047441705
GeneSymbolHDAC6
Binding site2424,2467
Score0.846
Seed1
Au0.456
Energy-20.5
Binding len21
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure