Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGCTGGCCGAGCTGCGGG
((((((((.((((((((.(((&))).))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047441743
GeneSymbolHUWE1
Binding site11339,11361
Score0.846
Seed1
Au0.426
Energy-23.4
Binding len22
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure