Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAAAAACTGCACCAGAAACAGCTGCAAA
((((((((((((((....(((&)))....))))))).........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047441844
GeneSymbolRAB40A
Binding site988,1019
Score0.846
Seed1
Au0.544
Energy-20.0
Binding len31
Me-4.906
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end4
PositionCDS
2D Structure