Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATTCTGCATTTTTAGCAAGTTC&GAACTGCTAAGGGGAAAGAAC
.((((...((((((((.(((((&)))))))))))))...)))).
Details
MiRNAhsa-miR-544a
RefseqIDNM_001330488
GeneSymbolPHC2
Binding site3607,3628
Score0.885
Seed0
Au0.5
Energy-15.2
Binding len21
Me-9.552
Phylopstem1.8416453750000001
Phylopflank2.5418923975
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure