Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGAGCTGTAAACCAGAGAGCTGCT
..((((((((((((.(((((.&))))).)))))).........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047442130
GeneSymbolMSN
Binding site3312,3340
Score0.846
Seed1
Au0.426
Energy-22.1
Binding len28
Me-5.692
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end6
Position3UTR
2D Structure