Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACGCGACGAATACATAAAGCGGCTTGAGGAACTGCAGCTCGCC
..(((((((((((((((((((&))))))))...........................))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047442137
GeneSymbolMTM1
Binding site1621,1669
Score0.846
Seed1
Au0.471
Energy-23.4
Binding len48
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure