Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCAGGAGGGGGCGGAGCCTTTCCCGGTGG
(((((((((((((((((((...&))))))))))))))...........))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330488
GeneSymbolPHC2
Binding site1821,1852
Score0.846
Seed1
Au0.338
Energy-26.4
Binding len31
Me-3.938
Phylopstem5.070711566666668
Phylopflank4.027573403750001
Longest consecutive pairings14
Position of longest consecutive pairings17
Pairings in 3prime end5
PositionCDS
2D Structure