Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCGCCCCCGGCAGCTTCCTCCGCCCGCGAG
((((((((((((.((((((((&)))))))).))...))))))..........)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047442193
GeneSymbolPPEF1
Binding site196,231
Score0.846
Seed1
Au0.265
Energy-19.4
Binding len35
Me-5.227
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end8
Position5UTR
2D Structure