Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACGATCACAGCTGCC
..(((((((.(((((((....&))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047442252
GeneSymbolHDAC8
Binding site435,451
Score0.846
Seed1
Au0.485
Energy-21.7
Binding len16
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure