Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGAGATAAAATCCATAGGAGACCAGA
..((((((((((((((((.((.&)))))))))...........))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047442329
GeneSymbolRPGR
Binding site3061,3092
Score0.846
Seed1
Au0.618
Energy-23.6
Binding len31
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure