Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCGCCGCTGCAC
.((((((.((((.....((((&)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348440
GeneSymbolAP3B2
Binding site16,32
Score0.846
Seed1
Au0.295
Energy-20.7
Binding len16
Me-9.221
Phylopstem-0.29189750000000003
Phylopflank0.15081699166666668
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end4
Position5UTR
2D Structure