Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTCACCTGTCCCAGCAGCTGTG
..((((((((((..(..((((&.))))..))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047442577
GeneSymbolSLITRK2
Binding site2831,2857
Score0.846
Seed1
Au0.426
Energy-20.3
Binding len20
Me-7.336
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure