Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTATGATTGCAGCA
.....((((((((((((((((&))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047442600
GeneSymbolCCNB3
Binding site3876,3894
Score1.0
Seed0
Au0.544
Energy-19.9
Binding len18
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure