Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTAGAGACAGCCAGTGG
((((((((..(((((.(((((.&)))))))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047442601
GeneSymbolCASK
Binding site6040,6060
Score0.923
Seed1
Au0.397
Energy-23.2
Binding len20
Me-6.47
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure