Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCTCAGAGAGGAAAACAAATGGTTGACCTACTTCTTGCTAT
...(((((((((((((((((((&)))))))))))))))........................)))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047442601
GeneSymbolCASK
Binding site5870,5914
Score0.846
Seed0
Au0.544
Energy-21.2
Binding len44
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings29
Pairings in 3prime end8
Position3UTR
2D Structure