Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAGAGGCTGCCCGTGCGGCTGCC
..(((((((((((((((.(((&))).))))......)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047442767
GeneSymbolKDM5D
Binding site3825,3854
Score0.846
Seed1
Au0.338
Energy-21.5
Binding len29
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure