Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAACCTACATGAATAGCATCAGATTGTATGCTGGAGA
((.((((((((((((((((((&)))))))))))....................))).)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047442771
GeneSymbolUSP9Y
Binding site2001,2044
Score1.0
Seed0
Au0.603
Energy-21.9
Binding len43
Me-5.495
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings32
Pairings in 3prime end8
PositionCDS
2D Structure