Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAAGAAGCAGCTGCC
..((((((((..((((.....&))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348452
GeneSymbolCHD1L
Binding site1864,1880
Score1.0
Seed1
Au0.529
Energy-19.2
Binding len16
Me-11.129
Phylopstem4.078659312499999
Phylopflank2.30677968
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure