Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACATTATTTCTTGTAGCTGCAT
.(((((((((((.((((((..&)))))).......))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047442793
GeneSymbolLOC389831
Binding site2232,2257
Score0.846
Seed1
Au0.721
Energy-20.0
Binding len25
Me-5.082
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure