Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGCTGCACTCACTTCCTTC&GAAGGGATTGGAGGCGGCA
...(((((.(((..(((((((&)))))))...)))))))).
Details
MiRNAhsa-miR-647
RefseqIDNM_001330416
GeneSymbolST8SIA2
Binding site2955,2974
Score0.923
Seed0
Au0.529
Energy-20.3
Binding len19
Me-9.717
Phylopstem0.10187918571428571
Phylopflank0.33010901249999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure