Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTCCCAGGAGGCTTGGGTTTGGGTGCCCACAGTGGGAGCTGGTGT
(((((((((((...((((((..&.))))))....))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047443909
GeneSymbolPTPN18
Binding site1333,1379
Score0.923
Seed1
Au0.382
Energy-27.0
Binding len23
Me-9.43
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure