Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTGCATGCCTTGGCCTCCCAAAGTGCTAGGA
.((((((((...(((((((((.&)))))))))................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047443919
GeneSymbolGGCX
Binding site5200,5234
Score0.923
Seed1
Au0.544
Energy-19.0
Binding len34
Me-11.207
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end7
Position3UTR
2D Structure