Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCCGACCCAGCCAGCTGCAGG
(((((((((((((((.((((.&))))..)))))..)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047443961
GeneSymbolGPC1
Binding site3928,3953
Score0.846
Seed1
Au0.382
Energy-23.0
Binding len25
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure