Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAATTCTTTCAACAACTGCCAGCTGTT
..(((((((((((((((((((&)))))..........)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047444146
GeneSymbolLRRTM1
Binding site3181,3212
Score0.923
Seed1
Au0.647
Energy-22.8
Binding len31
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end8
Position3UTR
2D Structure