Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGTGAACCGCAGCA
.....(((((((((...(((.&)))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047444258
GeneSymbolKIF5C
Binding site1171,1188
Score0.846
Seed0
Au0.426
Energy-21.1
Binding len17
Me-14.634
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure