Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTTGCACCTGCAAAAAGGCTGCAGT
((((((((((((.(((((((.&))))))).))))).....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047444327
GeneSymbolRGPD1
Binding site6498,6524
Score0.846
Seed1
Au0.603
Energy-20.7
Binding len26
Me-5.227
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end7
Position3UTR
2D Structure