Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATTAGATGCTGGA
..(((((((..(((((((....&)))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047444941
GeneSymbolPRPF40A
Binding site2195,2212
Score0.923
Seed1
Au0.706
Energy-16.9
Binding len17
Me-9.024
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end4
PositionCDS
2D Structure